Archive

Eukaryome 1.7, uploaded 21.08.2023
General release files:
readme_eukaryome_v1.7.xls

Due to file size concerns, these fasta files have been compressed into “.zip” containers. The files can be downloaded by clicking on the hyperlinks in the table below.

**Description of QIIME 2 releases**
Version	File name	File size	Number of sequences	Notes
1.7	QIIME2_EUK_long_tax_chim	24.89 MB	29 029	The related file includes reference sequences that are appropriate for long-read taxonomic identification and chimera detection, as well as SSU, ITS, and LSU regions combined.
1.7	QIIME2_EUK_ITS_chim	44.01 MB	263 907	The related file includes reference sequences that are appropriate for chimera detection in the ITS region.
1.7	QIIME2_EUK_ITS_tax	80.06 MB	1 026 001	The related file includes reference sequences that are appropriate for taxonomic identification of the ITS region.
1.7	QIIME2_EUK_SSU_tax_chim	43.49 MB	150 265	The related file includes reference sequences that are appropriate for taxonomic identification and chimera detection in the SSU region.
1.7	QIIME2_EUK_LSU_tax_chim	36.84 MB	99 160	The related file includes reference sequences that are appropriate for taxonomic identification and chimera detection in the LSU region.

**Description of UCHIME releases**
Version	File name	File size	Number of sequences	Notes
1.7	UCHIME_EUK_ITS	44.93 MB	263 907	The related file includes reference sequences that are appropriate for chimera detection in the ITS region.
1.7	UCHIME_EUK_long	28.25 MB	29 029	The related file includes reference sequences that are appropriate for long-read chimera detection, as well as SSU, ITS, and LSU regions combined.
1.7	UCHIME_EUK_LSU	37.92 MB	99 160	The related file includes reference sequences that are appropriate for chimera detection in the LSU region.
1.7	UCHIME_EUK_SSU	43.87 MB	150 265	The related file includes reference sequences that are appropriate for and chimera detection in the SSU region.

Description of mothur releases

Each “.zip” container contains one “.tax” and one “.fasta” file. Containers can be downloaded by clicking on the hyperlinks in the table below.


Version	File name	File size	Number of sequences	Notes
1.7	mothur_EUK_SSU_tax_chim	43.47 MB	150 265	The related file includes reference sequences and a taxonomy file that are appropriate for taxonomic identification and chimera detection in the SSU region.
1.7	mothur_EUK_LSU_tax_chim	36.85 MB	99 160	The related file includes reference sequences and a taxonomy file that are appropriate for taxonomic identification and chimera detection in the LSU region.
1.7	mothur_EUK_long_tax_chim	24.89 MB	29 029	The related file includes reference sequences and a taxonomy file that are appropriate for long-read taxonomic identification and chimera detection, as well as SSU, ITS, and LSU regions combined.
1.7	mothur_EUK_ITS_tax	136.2 MB	263 907	The related file includes reference sequences and a taxonomy file that are appropriate for taxonomic identification of the ITS region.

Description on BLAST releases

Version	File name	File size	Number of sequences	Notes
1.7	BLAST_EUK_long	40.18 MB	29 029	The related file includes reference sequences that are appropriate for long-read taxonomic identification, as well as SSU, ITS, and LSU regions combined.
1.7	BLAST_EUK_LSU	56.41 MB	99 160	The related file includes reference sequences that are appropriate for taxonomic identification in the LSU region
1.7	BLAST_EUK_SSU	62.67 MB	150 265	The related file includes reference sequences that are appropriate for taxonomic identification in the SSU region.
1.7	BLAST_EUK_ITS	60.14 MB	1 026 001	The related file includes reference sequences that are appropriate for taxonomic identification of the ITS region.