General FASTA
The general FASTA releases may be used for taxonomy assignment via the BLAST and as a reference database for reference-based chimera filtering. The files can be downloaded by clicking on the hyperlinks in the following table.
Version | File name | File size | Number of sequences | Notes |
1.9.3 | General_EUK_long | 42.9 MB | 75,166 | Reference “SSU-ITS-LSU” sequences combined |
1.9.3 | General_EUK_LSU | 61.9 MB | 227,652 | Reference LSU sequences |
1.9.3 | General_EUK_SSU | 57 MB | 221,425 | Reference SSU sequences |
1.9.3 | General_EUK_ITS | 149 MB | 1,395,894 | Reference ITS sequences |