UCHIME

Due to file size concerns, these UCHIME fasta files have been compressed into “.zip” containers. The files can be downloaded by clicking on the hyperlinks in the table below.

Description of UCHIME releases
Version  File name File size Number of sequences Notes
1.8 UCHIME_EUK_ITS 105 MB   1 069 642

The related file includes reference sequences that are appropriate for chimera detection in the ITS region.

1.8 UCHIME_EUK_long

28.6 MB

35 793

The related file includes reference sequences that are appropriate

for long-read chimera detection, as well as SSU, ITS, and LSU

regions combined.

1.8 UCHIME_EUK_LSU 43.3 MB 118 948

The related file includes reference sequences that are appropriate

for chimera detection in the LSU region.

1.8 UCHIME_EUK_SSU 48.6 MB 182 025

The related file includes reference sequences that are appropriate

for chimera detection in the SSU region.