General FASTA

The general FASTA releases may be used for taxonomy assignment via the BLAST and as a reference database for reference-based chimera filtering. The files can be downloaded by clicking on the hyperlinks in the following table.

Note: For unzipping files in Windows install 7-Zip software. If you are working in HPC, use the P7zip package to unzip the files.

Version	File name	File size	Number of sequences	Notes
2.0	General_EUK_long	49 MB	193,705	Reference “SSU-ITS-LSU” sequences combined
2.0	General_EUK_LSU	62 MB	377,679	Reference LSU sequences
2.0	General_EUK_SSU	58 MB	353,797	Reference SSU sequences
2.0	General_EUK_ITS	106 MB	1,597,427	Reference  ITS sequences