UCHIME
Due to file size concerns, these UCHIME fasta files have been compressed into “.zip” containers. The files can be downloaded by clicking on the hyperlinks in the table below.
Version | File name | File size | Number of sequences | Notes |
1.8 | UCHIME_EUK_ITS | 105 MB | 1 069 642 |
The related file includes reference sequences that are appropriate for chimera detection in the ITS region. |
1.8 | UCHIME_EUK_long |
28.6 MB |
35 793 |
The related file includes reference sequences that are appropriate for long-read chimera detection, as well as SSU, ITS, and LSU regions combined. |
1.8 | UCHIME_EUK_LSU | 43.3 MB | 118 948 |
The related file includes reference sequences that are appropriate for chimera detection in the LSU region. |
1.8 | UCHIME_EUK_SSU | 48.6 MB | 182 025 |
The related file includes reference sequences that are appropriate for chimera detection in the SSU region. |